WEB-based GEne SeT AnaLysis Toolkit
 
Translating gene lists into biological insights...
 


User data and parameters: User data: textAreaUpload.txt, Organism: hsapiens, Id Type: ensembl_gene_stable_id, Ref Set: entrezgene, Significance Level: Top10, Statistics Test: Hypergeometric, MTC: BH, Minimum: 2

The results for each enriched gene sets are listed in this table.
For each gene set, the first row lists database name, gene set name , and corresponding gene set ID. The second row lists the following statistics:
Finally, genes in the gene set are listed. For each gene, the table lists the user uploaded ID and value (optional), Entrez ID, Ensembl Gene Stable ID, Gene symbol, and description. Ensembl Gene Stable ID and Entrez Gene ID are linked to the Ensembl and Entrez Gene databases, respectively.

Database:Transcription Target       Name:hsa_GGGCGGR_V$SP1_Q6       ID:DB_ID:2452
C=2891; O=10; E=1.68; R=5.97; rawP=2.31e-06; adjP=9.70e-05
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000172660 NA TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 8148 ENSG00000172660
2  ENSG00000006712 NA PAF1 Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae) 54623 ENSG00000006712
3  ENSG00000175467 NA SART1 squamous cell carcinoma antigen recognized by T cells 9092 ENSG00000175467
4  ENSG00000130985 NA UBA1 ubiquitin-like modifier activating enzyme 1 7317 ENSG00000130985
5  ENSG00000125733 NA TRIP10 thyroid hormone receptor interactor 10 9322 ENSG00000125733
6  ENSG00000101940 NA WDR13 WD repeat domain 13 64743 ENSG00000101940
7  ENSG00000204463 NA BAG6 BCL2-associated athanogene 6 7917 ENSG00000204463
8  ENSG00000182872 NA RBM10 RNA binding motif protein 10 8241 ENSG00000182872
9  ENSG00000140829 NA DHX38 DEAH (Asp-Glu-Ala-His) box polypeptide 38 9785 ENSG00000140829
10  ENSG00000021574 NA SPAST spastin 6683 ENSG00000021574


Database:Transcription Target       Name:hsa_SCGGAAGY_V$ELK1_02       ID:DB_ID:2413
C=1176; O=6; E=0.68; R=8.80; rawP=4.61e-05; adjP=0.0006
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000175467 NA SART1 squamous cell carcinoma antigen recognized by T cells 9092 ENSG00000175467
2  ENSG00000204463 NA BAG6 BCL2-associated athanogene 6 7917 ENSG00000204463
3  ENSG00000196235 NA SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 6829 ENSG00000196235
4  ENSG00000130985 NA UBA1 ubiquitin-like modifier activating enzyme 1 7317 ENSG00000130985
5  ENSG00000138834 NA MAPK8IP3 mitogen-activated protein kinase 8 interacting protein 3 23162 ENSG00000138834
6  ENSG00000205937 NA RNPS1 RNA binding protein S1, serine-rich domain 10921 ENSG00000205937


Database:Transcription Target       Name:hsa_GATTGGY_V$NFY_Q6_01       ID:DB_ID:2440
C=1141; O=6; E=0.66; R=9.07; rawP=3.89e-05; adjP=0.0006
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000172660 NA TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 8148 ENSG00000172660
2  ENSG00000006712 NA PAF1 Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae) 54623 ENSG00000006712
3  ENSG00000182872 NA RBM10 RNA binding motif protein 10 8241 ENSG00000182872
4  ENSG00000204463 NA BAG6 BCL2-associated athanogene 6 7917 ENSG00000204463
5  ENSG00000140829 NA DHX38 DEAH (Asp-Glu-Ala-His) box polypeptide 38 9785 ENSG00000140829
6  ENSG00000127837 NA AAMP angio-associated, migratory cell protein 14 ENSG00000127837


Database:Transcription Target       Name:hsa_GCCATNTTG_V$YY1_Q6       ID:DB_ID:2459
C=419; O=4; E=0.24; R=16.47; rawP=9.45e-05; adjP=0.0010
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000172660 NA TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 8148 ENSG00000172660
2  ENSG00000182872 NA RBM10 RNA binding motif protein 10 8241 ENSG00000182872
3  ENSG00000130985 NA UBA1 ubiquitin-like modifier activating enzyme 1 7317 ENSG00000130985
4  ENSG00000101940 NA WDR13 WD repeat domain 13 64743 ENSG00000101940


Database:Transcription Target       Name:hsa_GGGAGGRR_V$MAZ_Q6       ID:DB_ID:2430
C=2250; O=7; E=1.30; R=5.37; rawP=0.0002; adjP=0.0017
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000172660 NA TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 8148 ENSG00000172660
2  ENSG00000204463 NA BAG6 BCL2-associated athanogene 6 7917 ENSG00000204463
3  ENSG00000125733 NA TRIP10 thyroid hormone receptor interactor 10 9322 ENSG00000125733
4  ENSG00000108344 NA PSMD3 proteasome (prosome, macropain) 26S subunit, non-ATPase, 3 5709 ENSG00000108344
5  ENSG00000141456 NA PELP1 proline, glutamate and leucine rich protein 1 27043 ENSG00000141456
6  ENSG00000101940 NA WDR13 WD repeat domain 13 64743 ENSG00000101940
7  ENSG00000127837 NA AAMP angio-associated, migratory cell protein 14 ENSG00000127837


Database:Transcription Target       Name:hsa_V$ELK1_02       ID:DB_ID:1859
C=245; O=3; E=0.14; R=21.12; rawP=0.0004; adjP=0.0028
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000204463 NA BAG6 BCL2-associated athanogene 6 7917 ENSG00000204463
2  ENSG00000196235 NA SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 6829 ENSG00000196235
3  ENSG00000138834 NA MAPK8IP3 mitogen-activated protein kinase 8 interacting protein 3 23162 ENSG00000138834


Database:Transcription Target       Name:hsa_CCCNNGGGAR_V$OLF1_01       ID:DB_ID:2443
C=314; O=3; E=0.18; R=16.48; rawP=0.0008; adjP=0.0048
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000182872 NA RBM10 RNA binding motif protein 10 8241 ENSG00000182872
2  ENSG00000101940 NA WDR13 WD repeat domain 13 64743 ENSG00000101940
3  ENSG00000127837 NA AAMP angio-associated, migratory cell protein 14 ENSG00000127837


Database:Transcription Target       Name:hsa_SNACANNNYSYAGA_UNKNOWN       ID:DB_ID:2359
C=89; O=2; E=0.05; R=38.77; rawP=0.0012; adjP=0.0061
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000125733 NA TRIP10 thyroid hormone receptor interactor 10 9322 ENSG00000125733
2  ENSG00000127837 NA AAMP angio-associated, migratory cell protein 14 ENSG00000127837


Database:Transcription Target       Name:hsa_AACYNNNNTTCCS_UNKNOWN       ID:DB_ID:1873
C=93; O=2; E=0.05; R=37.10; rawP=0.0013; adjP=0.0061
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000125733 NA TRIP10 thyroid hormone receptor interactor 10 9322 ENSG00000125733
2  ENSG00000127837 NA AAMP angio-associated, migratory cell protein 14 ENSG00000127837


Database:Transcription Target       Name:hsa_V$ZIC2_01       ID:DB_ID:2107
C=244; O=2; E=0.14; R=14.14; rawP=0.0088; adjP=0.0175
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000204463 NA BAG6 BCL2-associated athanogene 6 7917 ENSG00000204463
2  ENSG00000101940 NA WDR13 WD repeat domain 13 64743 ENSG00000101940




WebGestalt is currently developed and maintained by Jing Wang and Bing Zhang at the Zhang Lab. Other people who have made significant contribution to the project include Dexter Duncan, Stefan Kirov, Zhiao Shi, and Jay Snoddy.

Funding credits: NIH/NIAAA (U01 AA016662, U01 AA013512); NIH/NIDA (P01 DA015027); NIH/NIMH (P50 MH078028, P50 MH096972); NIH/NCI (U24 CA159988); NIH/NIGMS (R01 GM088822).